FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Sdc
Name
Syndecan
Annotation Symbol
CG10497
FlyBase ID
FBgn0010415
Paralogues
No paralogues
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head57 ± 5.31.550 ± 1.42.11.14n.s.  
Eye42 ± 2.21.134 ± 2.11.51.22n.s.  
Brain / CNS56 ± 1.71.553 ± 8.82.21.07n.s.37 ± 1.70.6
Thoracicoabdominal ganglion55 ± 0.21.454 ± 0.62.31.01n.s.  
Crop65 ± 0.61.752 ± 9.32.21.23n.s.  
Midgut29 ± 1.60.721 ± 3.00.91.37p < 0.0526 ± 3.90.4
Hindgut52 ± 7.91.455 ± 4.02.30.95n.s.35 ± 4.80.6
Malpighian Tubules24 ± 1.80.625 ± 3.81.10.97n.s.15 ± 3.20.3
Rectal pad52 ± 5.31.347 ± 1.32.01.11n.s.  
Salivary gland22 ± 5.40.619 ± 1.10.81.18n.s.23 ± 2.30.4
Fat body107 ± 2.62.886 ± 7.33.71.25p < 0.05210 ± 353.6
Heart70 ± 261.862 ± 442.61.13n.s.  
Trachea      28 ± 2.90.5
Ovary  19 ± 1.40.8    
Virgin Spermatheca  89 ± 163.8    
Mated Spermatheca  103 ± 5.04.4    
Testis22 ± 3.80.6      
Accessory glands16 ± 1.60.4      
Carcass66 ± 5.11.753 ± 132.31.25n.s.26 ± 4.50.5
Garland cells      140 ± 322.4
Whole body38 ± 0.623 ± 1.41.64p < 0.0158 ± 4.3
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0071706
RBFBtr0071707
RDFBtr0273206
RGFBtr0305897
RHFBtr0342892
RIFBtr0342893
RJFBtr0342894
RKFBtr0342895
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0010415 the situation is:

No data for FBtr0474169 — included in FBtr0071706: Alternative Stop codons (readthrough)

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***