FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
oaf
Name
out at first
Annotation Symbol
CG9884
FlyBase ID
FBgn0011818
Paralogues
No paralogues
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head13 ± 1.61.912 ± 1.20.91.10n.s.  
Eye11 ± 1.31.68.9 ± 0.60.71.25n.s.  
Brain / CNS21 ± 0.73.120 ± 4.21.51.07n.s.7.7 ± 0.72.1
Thoracicoabdominal ganglion23 ± 3.13.324 ± 0.91.80.94n.s.  
Crop5.3 ± 0.80.85.1 ± 1.10.41.04n.s.  
Midgut5.7 ± 1.00.84.0 ± 0.40.31.41n.s.6.1 ± 0.31.6
Hindgut3.0 ± 0.40.43.8 ± 0.20.30.81n.s.2.9 ± 0.60.8
Malpighian Tubules5.9 ± 1.00.95.6 ± 0.90.41.05n.s.2.5 ± 0.80.7
Rectal pad2.5 ± 0.30.43.3 ± 0.10.20.77p < 0.05  
Salivary gland6.1 ± 0.00.97.4 ± 2.00.50.82n.s.3.1 ± 0.40.8
Fat body2.7 ± 0.70.44.0 ± 0.60.30.67n.s.7.3 ± 4.62.0
Heart5.8 ± 0.30.811 ± 5.30.80.52n.s.  
Trachea      5.5 ± 0.31.5
Ovary  20 ± 1.61.5    
Virgin Spermatheca  2.5 ± 0.20.2    
Mated Spermatheca  3.1 ± 0.40.2    
Testis28 ± 2.64.1      
Accessory glands3.2 ± 0.30.5      
Carcass5.0 ± 0.90.76.2 ± 1.20.50.81n.s.3.8 ± 1.11.0
Garland cells      3.5 ± 0.31.0
Whole body6.9 ± 0.114 ± 1.30.51p < 0.053.7 ± 0.6
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0077777
RBFBtr0077778
RCFBtr0077779
download
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0011818 the situation is:

No data for FBtr0077780 — included in FBtr0077777: Alternative Stop codons (readthrough)

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***