FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Rtca
Name
RNA 3'-terminal phosphate cyclase
Annotation Symbol
CG4061
FlyBase ID
FBgn0025630
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head2.5 ± 0.61.03.0 ± 1.10.70.84n.s.  
Eye4.3 ± 0.31.83.2 ± 0.30.81.34n.s.  
Brain / CNS5.6 ± 0.42.34.3 ± 0.21.01.30p < 0.055.8 ± 0.72.6
Thoracicoabdominal ganglion5.3 ± 0.42.25.3 ± 0.11.21.01n.s.  
Crop2.7 ± 0.81.13.1 ± 0.20.70.89n.s.  
Midgut2.7 ± 0.51.12.5 ± 0.10.61.11n.s.1.7 ± 0.20.8
Hindgut2.4 ± 0.11.02.3 ± 0.20.51.05n.s.2.1 ± 0.71.0
Malpighian Tubules2.1 ± 0.30.91.7 ± 0.60.41.06n.s.1.8 ± 0.30.8
Rectal pad2.0 ± 0.20.81.9 ± 0.40.41.00n.s.  
Salivary gland2.7 ± 0.51.13.4 ± 1.00.80.81n.s.2.4 ± 0.31.1
Fat body1.4 ± 0.70.61.1 ± 0.20.31.00n.s.2.0 ± 1.00.9
Heart2.5 ± 0.51.03.0 ± 2.50.70.85n.s.  
Trachea      2.6 ± 0.31.2
Ovary  3.7 ± 0.20.9    
Virgin Spermatheca  1.5 ± 0.70.3    
Mated Spermatheca  1.4 ± 0.90.3    
Testis6.5 ± 0.32.6      
Accessory glands3.5 ± 0.71.4      
Carcass2.0 ± 0.00.82.3 ± 0.30.50.86n.s.2.3 ± 0.81.1
Garland cells      2.6 ± 0.91.2
Whole body2.5 ± 0.34.3 ± 0.30.58p < 0.012.2 ± 0.2
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0070330
RBFBtr0344156
download
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.