FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Spt6
Name
Spt6
Annotation Symbol
CG12225
FlyBase ID
FBgn0028982
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head8.6 ± 0.31.012 ± 1.80.70.73n.s.  
Eye11 ± 0.21.213 ± 0.30.80.86n.s.  
Brain / CNS11 ± 0.41.211 ± 0.30.61.00n.s.16 ± 1.22.1
Thoracicoabdominal ganglion9.6 ± 0.11.110 ± 0.40.60.95n.s.  
Crop9.0 ± 1.21.08.0 ± 2.20.51.12n.s.  
Midgut14 ± 0.41.69.2 ± 0.80.61.56p < 0.0112 ± 0.81.6
Hindgut8.4 ± 0.40.910.0 ± 0.30.60.84p < 0.016.2 ± 1.40.8
Malpighian Tubules11 ± 1.61.212 ± 1.60.70.94n.s.7.5 ± 1.11.0
Fat body8.9 ± 1.11.012 ± 1.10.70.72p < 0.0514 ± 1.21.8
Salivary gland14 ± 0.91.513 ± 1.40.81.09n.s.19 ± 2.52.5
Heart14 ± 0.51.621 ± 9.31.30.66n.s.  
Trachea      12 ± 0.81.6
Ovary  19 ± 0.51.1    
Virgin Spermatheca  10 ± 0.80.6    
Mated Spermatheca  12 ± 1.90.7    
Testis4.5 ± 0.40.5      
Accessory glands26 ± 2.92.9      
Carcass8.6 ± 1.11.012 ± 0.50.70.73p < 0.057.4 ± 0.21.0
Rectal pad7.4 ± 0.60.86.5 ± 0.10.41.14n.s.  
Garland cells      11 ± 0.31.4
Whole body8.9 ± 0.617 ± 1.70.54p < 0.057.6 ± 0.5
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0070896
RBFBtr0340027
download
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.