FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
 SK
Name
 small conductance calcium-activated potassium channel
Annotation Symbol
 CG10706
FlyBase ID
FBgn0029761
Paralogues
 Paralogues(s)
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head23 ± 2.43.719 ± 7.69.61.17n.s.  
Eye20 ± 4.33.418 ± 1.49.11.13n.s.  
Brain / CNS13 ± 0.92.112 ± 2.86.21.01n.s.3.3 ± 0.51.7
Thoracicoabdominal ganglion17 ± 3.72.819 ± 1.49.30.91n.s.  
Crop3.3 ± 0.00.53.5 ± 0.51.80.94n.s.  
Midgut1.1 ± 0.20.20.4 ± 0.1N.A.1.00p < 0.050.2 ± 0.0N.A.
Hindgut1.4 ± 0.30.21.1 ± 0.3N.A.1.00n.s.0.6 ± 0.1N.A.
Malpighian Tubules0.2 ± 0.10.00.3 ± 0.1N.A.1.00n.s.0.1 ± 0.0N.A.
Rectal pad1.8 ± 0.10.31.3 ± 0.1N.A.1.00p < 0.01  
Salivary gland2.6 ± 0.50.41.2 ± 0.1N.A.1.32n.s.0.8 ± 0.2N.A.
Fat body0.5 ± 0.40.11.2 ± 0.5N.A.1.00n.s.0.1 ± 0.1N.A.
Heart1.8 ± 0.70.32.2 ± 1.61.10.90n.s.  
Trachea      0.2 ± 0.0N.A.
Ovary  0.2 ± 0.0N.A.    
Virgin Spermatheca  8.2 ± 7.24.1    
Mated Spermatheca  8.0 ± 3.84.0    
Testis1.4 ± 0.50.2      
Accessory glands0.8 ± 0.20.1      
Carcass1.6 ± 0.40.31.1 ± 0.2N.A.1.00n.s.1.0 ± 0.2N.A.
Garland cells      2.5 ± 1.01.2
Whole body6.1 ± 0.31.6 ± 0.13.0p < 0.010.4 ± 0.2
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Rotate to see Transcript Table
View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RHFBtr0300467
RIFBtr0301949
RJFBtr0301950
RLFBtr0301952
RMFBtr0301953
RNFBtr0301954
ROFBtr0331602
RPFBtr0331603
RQFBtr0331604
RUFBtr0344558
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0029761 the situation is:

No data for FBtr0301951 — included in FBtr0344558: Alternative Stop codons (readthrough)

No data for FBtr0344556 — included in FBtr0331603: Alternative Stop codons (readthrough)

No data for FBtr0344555 — included in FBtr0300467: Alternative Stop codons (readthrough)

No data for FBtr0344557 — included in FBtr0301952: Alternative Stop codons (readthrough)

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***