FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Rat1
Name
Rat1 5'-3' exoribonuclease
Annotation Symbol
CG10354
FlyBase ID
FBgn0031868
Paralogues
Paralogues(s)
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head4.5 ± 0.41.34.8 ± 0.80.50.95n.s.  
Eye4.1 ± 0.01.24.8 ± 0.40.50.85n.s.  
Brain / CNS5.5 ± 0.31.65.1 ± 0.60.51.07n.s.10 ± 1.02.3
Thoracicoabdominal ganglion4.8 ± 0.11.44.9 ± 0.20.50.99n.s.  
Crop5.2 ± 0.61.55.2 ± 1.40.51.00n.s.  
Midgut6.7 ± 0.91.97.3 ± 0.00.70.91n.s.3.6 ± 0.40.8
Hindgut4.8 ± 0.51.45.9 ± 0.20.60.82p < 0.054.3 ± 1.21.0
Malpighian Tubules6.9 ± 1.02.06.9 ± 0.90.71.01n.s.4.0 ± 0.60.9
Rectal pad4.1 ± 0.41.24.0 ± 0.20.41.02n.s.  
Salivary gland5.3 ± 0.51.56.3 ± 1.80.60.84n.s.8.3 ± 0.71.9
Fat body4.4 ± 0.91.36.8 ± 0.60.70.64p < 0.058.6 ± 1.32.0
Heart7.0 ± 1.62.09.5 ± 0.90.90.74n.s.  
Trachea      8.7 ± 0.42.0
Ovary  12 ± 0.61.1    
Virgin Spermatheca  5.1 ± 0.30.5    
Mated Spermatheca  5.1 ± 0.70.5    
Testis2.8 ± 0.70.8      
Accessory glands7.2 ± 0.82.1      
Carcass4.4 ± 0.51.36.6 ± 1.00.60.67p < 0.056.0 ± 1.31.4
Garland cells      4.5 ± 0.81.0
Whole body3.4 ± 0.210 ± 1.00.33p < 0.014.4 ± 0.7
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0079345
RBFBtr0332324
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.