FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Rat1
Name
Rat1 5'-3' exoribonuclease
Annotation Symbol
CG10354
FlyBase ID
FBgn0031868
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head4.2 ± 0.31.34.3 ± 0.70.50.96n.s.  
Eye3.7 ± 0.11.24.2 ± 0.10.40.88n.s.  
Brain / CNS5.0 ± 0.31.64.7 ± 0.40.51.06n.s.9.2 ± 0.92.3
Thoracicoabdominal ganglion4.3 ± 0.21.44.4 ± 0.20.50.99n.s.  
Crop4.7 ± 0.41.54.8 ± 1.20.50.99n.s.  
Midgut6.0 ± 0.81.95.2 ± 0.30.61.16n.s.3.4 ± 0.40.8
Hindgut4.2 ± 0.41.34.6 ± 0.40.50.93n.s.3.3 ± 0.90.8
Malpighian Tubules5.7 ± 0.71.86.0 ± 0.80.60.94n.s.3.3 ± 0.30.8
Fat body3.3 ± 0.81.05.8 ± 0.50.60.57p < 0.057.7 ± 1.21.9
Salivary gland4.8 ± 0.41.55.7 ± 1.60.60.85n.s.7.4 ± 0.71.8
Heart6.4 ± 1.52.09.1 ± 1.51.00.70n.s.  
Trachea      7.4 ± 0.51.8
Ovary  10 ± 0.61.1    
Virgin Spermatheca  4.4 ± 0.40.5    
Mated Spermatheca  4.8 ± 0.80.5    
Testis2.4 ± 0.50.8      
Accessory glands6.6 ± 0.72.1      
Carcass3.9 ± 0.41.25.7 ± 0.70.60.69p < 0.055.0 ± 0.11.2
Rectal pad3.9 ± 0.51.23.9 ± 0.10.41.01n.s.  
Garland cells      4.4 ± 0.81.1
Whole body3.1 ± 0.29.3 ± 0.90.34p < 0.014.1 ± 0.6
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0079345
RBFBtr0332324
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.