FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Hmgcl
Name
3-Hydroxymethyl-3-methylglutaryl-CoA lyase
Annotation Symbol
CG10399
FlyBase ID
FBgn0031877
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head4.8 ± 0.70.86.8 ± 1.81.00.70n.s.  
Eye4.8 ± 1.80.86.6 ± 0.31.00.72n.s.  
Brain / CNS1.2 ± 0.10.21.2 ± 0.40.21.00n.s.1.8 ± 0.40.3
Thoracicoabdominal ganglion2.8 ± 0.40.52.2 ± 0.30.31.27n.s.  
Crop5.0 ± 0.80.84.9 ± 1.20.81.02n.s.  
Midgut11 ± 0.81.85.2 ± 0.80.82.1p < 0.014.2 ± 0.90.7
Hindgut8.2 ± 0.11.48.9 ± 0.61.40.92n.s.11 ± 2.31.7
Malpighian Tubules25 ± 1.94.220 ± 1.93.11.24p < 0.0512 ± 1.61.8
Fat body8.7 ± 0.31.46.8 ± 3.01.01.29n.s.18 ± 3.12.9
Salivary gland8.0 ± 0.71.36.1 ± 0.30.91.31n.s.21 ± 3.73.3
Heart15 ± 1.52.510 ± 2.11.51.47p < 0.05  
Trachea      5.2 ± 0.10.8
Ovary  5.9 ± 1.70.9    
Virgin Spermatheca  2.2 ± 1.40.3    
Mated Spermatheca  5.3 ± 2.40.8    
Testis1.8 ± 0.20.3      
Accessory glands3.2 ± 0.30.5      
Carcass11 ± 0.81.89.7 ± 1.61.51.10n.s.10 ± 0.51.6
Rectal pad5.2 ± 0.60.95.0 ± 0.10.81.04n.s.  
Garland cells      4.6 ± 3.90.7
Whole body6.0 ± 1.86.5 ± 1.40.92n.s.6.4 ± 2.7
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0079351
RBFBtr0343774
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.