FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
HisT
Name
Histamine transporter
Annotation Symbol
CG1358
FlyBase ID
FBgn0033196
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head31 ± 3.93.127 ± 1.14.71.15n.s.  
Eye30 ± 2.82.922 ± 3.53.71.36n.s.  
Brain / CNS53 ± 1.75.252 ± 8.28.81.03n.s.5.4 ± 1.21.8
Thoracicoabdominal ganglion62 ± 4.36.159 ± 1.5101.05n.s.  
Crop0.7 ± 0.40.10.9 ± 0.10.21.00n.s.  
Midgut4.3 ± 0.20.411 ± 1.11.90.38p < 0.0113 ± 1.04.5
Hindgut3.6 ± 0.80.49.9 ± 1.01.70.37p < 0.010.4 ± 0.10.1
Malpighian Tubules2.9 ± 2.30.33.5 ± 0.80.60.83n.s.1.3 ± 0.50.4
Rectal pad1.2 ± 0.10.11.5 ± 0.20.31.00n.s.  
Salivary gland2.3 ± 0.60.22.2 ± 0.90.41.03n.s.1.2 ± 0.30.4
Fat body13 ± 0.21.34.1 ± 1.30.73.3p < 0.011.3 ± 0.90.4
Heart14 ± 2.21.45.8 ± 0.81.02.4p < 0.05  
Trachea      0.2 ± 0.10.1
Ovary  5.3 ± 0.70.9    
Virgin Spermatheca  5.6 ± 3.01.0    
Mated Spermatheca  3.0 ± 0.80.5    
Testis3.5 ± 0.70.3      
Accessory glands26 ± 2.92.5      
Carcass8.8 ± 0.80.94.5 ± 0.80.81.96p < 0.010.6 ± 0.20.2
Garland cells      0.6 ± 0.40.2
Whole body10 ± 0.35.9 ± 0.61.73p < 0.013.0 ± 0.6
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0088948
RBFBtr0088949
RCFBtr0088950
RDFBtr0303287
download
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.