FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
CG2162
Annotation Symbol
CG2162
FlyBase ID
FBgn0035388
Paralogues
No paralogues
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head8.3 ± 1.11.09.6 ± 3.10.90.87n.s.  
Eye13 ± 2.01.613 ± 1.01.30.95n.s.  
Brain / CNS14 ± 0.81.813 ± 1.61.31.07n.s.8.7 ± 0.40.9
Thoracicoabdominal ganglion12 ± 0.81.513 ± 1.41.20.96n.s.  
Crop9.4 ± 0.91.28.7 ± 2.20.81.09n.s.  
Midgut12 ± 1.51.510 ± 0.71.01.21n.s.19 ± 2.81.9
Hindgut12 ± 0.91.516 ± 0.71.60.75p < 0.018.8 ± 2.50.9
Malpighian Tubules20 ± 5.12.514 ± 2.51.31.43n.s.13 ± 3.71.3
Rectal pad13 ± 0.81.611 ± 0.31.11.13n.s.  
Salivary gland12 ± 0.41.512 ± 2.71.20.98n.s.12 ± 1.61.2
Fat body11 ± 1.91.415 ± 2.61.40.75n.s.13 ± 1.21.3
Heart13 ± 0.21.713 ± 1.21.21.05n.s.  
Trachea      7.7 ± 0.20.8
Ovary  13 ± 2.01.3    
Virgin Spermatheca  8.9 ± 1.70.8    
Mated Spermatheca  8.6 ± 2.00.8    
Testis22 ± 1.12.7      
Accessory glands7.7 ± 1.91.0      
Carcass13 ± 0.81.713 ± 0.31.21.03n.s.10 ± 3.01.0
Garland cells      6.6 ± 0.90.7
Whole body8.1 ± 0.411 ± 1.30.77n.s.9.8 ± 1.8
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
REFBtr0345028
RFFBtr0345029
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0035388 the situation is:

No data for FBtr0072981 — included in FBtr0345028: Alternative Start codons in same reading frame

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***