FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
RhoGEF4
Name
Rho guanine nucleotide exchange factor 4
Annotation Symbol
CG8606
FlyBase ID
FBgn0035761
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head0.1 ± 0.1N.A.0.1 ± 0.10.01.00n.s.  
Eye0.1 ± 0.1N.A.0.1 ± 0.10.01.00n.s.  
Brain / CNS0.1 ± 0.0N.A.0.1 ± 0.00.01.00n.s.9.1 ± 0.64.1
Thoracicoabdominal ganglion0.0 ± 0.0N.A.0.2 ± 0.10.11.00n.s.  
Crop0.1 ± 0.1N.A.0.5 ± 0.10.11.00n.s.  
Midgut0.3 ± 0.1N.A.0.6 ± 0.30.21.00n.s.1.9 ± 0.10.8
Hindgut0.2 ± 0.1N.A.0.2 ± 0.00.11.00n.s.0.3 ± 0.20.1
Malpighian Tubules0.1 ± 0.1N.A.0.3 ± 0.10.11.00n.s.0.1 ± 0.10.0
Fat body0.2 ± 0.3N.A.0.3 ± 0.50.11.00n.s.0.4 ± 0.10.2
Salivary gland0.2 ± 0.0N.A.1.5 ± 0.90.51.00n.s.0.6 ± 0.20.3
Heart0.1 ± 0.0N.A.2.4 ± 2.90.70.84n.s.  
Trachea      2.1 ± 0.50.9
Ovary  5.3 ± 0.31.6    
Virgin Spermatheca  0.2 ± 0.30.1    
Mated Spermatheca  0.2 ± 0.10.0    
Testis1.3 ± 0.2N.A.      
Accessory glands0.1 ± 0.1N.A.      
Carcass0.1 ± 0.0N.A.0.8 ± 0.50.21.00n.s.2.6 ± 0.21.2
Rectal pad0.1 ± 0.1N.A.0.3 ± 0.10.11.00n.s.  
Garland cells      1.5 ± 1.40.7
Whole body0.2 ± 0.13.3 ± 1.10.60p < 0.052.2 ± 0.4
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0076885
RBFBtr0076886
download
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.