FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
CG3961
Annotation Symbol
CG3961
FlyBase ID
FBgn0036821
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head48 ± 4.71.450 ± 0.74.90.97n.s.  
Eye65 ± 5.41.849 ± 2.24.81.31n.s.  
Brain / CNS9.5 ± 0.70.310 ± 0.71.00.93n.s.4.1 ± 0.40.1
Thoracicoabdominal ganglion22 ± 0.80.619 ± 1.81.91.15n.s.  
Crop44 ± 2.41.232 ± 2.73.11.38p < 0.05  
Midgut15 ± 1.50.414 ± 2.11.41.08n.s.7.1 ± 2.60.2
Hindgut0.8 ± 0.30.01.2 ± 0.00.11.00n.s.2.5 ± 0.40.1
Malpighian Tubules11 ± 1.10.320 ± 5.72.00.53n.s.24 ± 9.90.8
Rectal pad5.7 ± 0.20.212 ± 2.31.10.49n.s.  
Salivary gland12 ± 2.20.34.9 ± 0.20.52.5n.s.6.3 ± 1.90.2
Fat body15 ± 4.60.415 ± 3.71.50.95n.s.177 ± 285.8
Heart41 ± 7.01.235 ± 213.41.20n.s.  
Trachea      3.4 ± 1.30.1
Ovary  0.9 ± 0.30.1    
Virgin Spermatheca  6.4 ± 2.60.6    
Mated Spermatheca  7.2 ± 1.90.7    
Testis1.0 ± 0.20.0      
Accessory glands0.7 ± 0.10.0      
Carcass62 ± 1.51.848 ± 5.94.71.30p < 0.0518 ± 2.60.6
Garland cells      62 ± 6.72.0
Whole body35 ± 1.410 ± 1.43.5p < 0.0131 ± 4.3
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0075077
RCFBtr0075078
RDFBtr0302322
REFBtr0333712
download
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.