FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Pcif1
Name
Phosphorylated CTD-interacting factor 1
Annotation Symbol
CG11399
FlyBase ID
FBgn0037021
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head7.9 ± 0.51.78.2 ± 0.80.60.96n.s.  
Eye7.2 ± 0.21.66.8 ± 0.50.51.07n.s.  
Brain / CNS14 ± 0.83.013 ± 1.50.91.05n.s.7.7 ± 0.12.4
Thoracicoabdominal ganglion5.8 ± 0.41.36.6 ± 0.10.50.88n.s.  
Crop6.5 ± 0.21.45.7 ± 1.30.41.15n.s.  
Midgut3.7 ± 0.30.81.9 ± 0.10.11.85p < 0.012.2 ± 0.60.7
Hindgut3.4 ± 0.20.73.6 ± 0.20.20.95n.s.1.8 ± 0.30.6
Malpighian Tubules2.9 ± 0.20.63.0 ± 0.30.20.95n.s.1.3 ± 0.20.4
Fat body2.0 ± 0.70.43.6 ± 0.30.20.57p < 0.051.9 ± 0.40.6
Salivary gland4.7 ± 0.21.06.9 ± 3.00.50.68n.s.7.0 ± 3.82.2
Heart4.3 ± 0.50.913 ± 110.90.33n.s.  
Trachea      4.4 ± 0.31.4
Ovary  20 ± 1.01.4    
Virgin Spermatheca  3.8 ± 0.90.3    
Mated Spermatheca  4.0 ± 1.00.3    
Testis1.8 ± 0.40.4      
Accessory glands4.7 ± 0.41.0      
Carcass4.2 ± 0.40.96.3 ± 1.10.40.66n.s.3.6 ± 0.21.1
Rectal pad3.1 ± 0.30.73.8 ± 0.10.30.81n.s.  
Garland cells      3.2 ± 0.91.0
Whole body4.6 ± 0.514 ± 0.20.32p < 0.013.2 ± 0.9
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RBFBtr0078277
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.