FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
lncRNA:CR33963
Name
long non-coding RNA:CR33963
Annotation Symbol
CR33963
FlyBase ID
FBgn0053963
Paralogues
No paralogues
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head4.6 ± 0.21.18.1 ± 1.02.00.57p < 0.05  
Eye6.7 ± 0.11.611 ± 2.12.70.62n.s.  
Brain / CNS1.5 ± 0.00.32.3 ± 0.50.60.88n.s.3.5 ± 0.90.8
Thoracicoabdominal ganglion4.4 ± 0.31.04.9 ± 0.01.20.90n.s.  
Crop8.1 ± 0.61.98.5 ± 0.72.10.96n.s.  
Midgut15 ± 2.83.68.0 ± 1.12.01.93p < 0.056.2 ± 1.61.5
Hindgut8.2 ± 1.51.99.5 ± 1.72.30.87n.s.5.4 ± 0.51.3
Malpighian Tubules8.9 ± 0.42.111 ± 1.92.60.83n.s.4.8 ± 1.01.1
Rectal pad5.6 ± 1.31.36.7 ± 0.21.70.83n.s.  
Salivary gland9.1 ± 0.32.19.8 ± 2.12.40.93n.s.2.5 ± 0.30.6
Fat body40 ± 9.19.552 ± 15130.77n.s.11 ± 1.42.7
Heart11 ± 4.32.713 ± 8.03.10.89n.s.  
Trachea      7.7 ± 2.11.8
Ovary  2.9 ± 0.50.7    
Virgin Spermatheca  25 ± 3.06.3    
Mated Spermatheca  32 ± 2.58.0    
Testis1.0 ± 0.40.2      
Accessory glands4.2 ± 0.81.0      
Carcass6.3 ± 1.01.59.7 ± 3.12.40.65n.s.4.6 ± 0.71.1
Garland cells      16 ± 1.13.7
Whole body4.2 ± 0.34.1 ± 0.11.04n.s.4.2 ± 1.1
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0100004
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These data are for a lncRNA (Long intervening non-coding RNA) that does not encode a protein.
It is advisable to check any positive sequence reads in the UCSC Genome Browser (link above). (N.B. Data for Fat Body and Spermatheca may not be comparable with those from other tissues.)