FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
lncRNA:CR33963
Annotation Symbol
CR33963
FlyBase ID
FBgn0053963
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head3.9 ± 0.31.16.8 ± 1.32.00.57n.s.  
Eye6.1 ± 0.11.79.1 ± 0.82.70.67n.s.  
Brain / CNS1.3 ± 0.00.42.0 ± 0.40.60.99n.s.3.2 ± 0.80.8
Thoracicoabdominal ganglion3.9 ± 0.31.14.4 ± 0.01.30.89n.s.  
Crop7.3 ± 0.52.07.7 ± 0.62.30.95n.s.  
Midgut15 ± 2.74.17.4 ± 1.22.21.98p < 0.055.9 ± 1.51.5
Hindgut7.3 ± 1.82.07.7 ± 1.22.30.95n.s.4.9 ± 0.51.3
Malpighian Tubules7.4 ± 0.42.19.4 ± 1.02.80.79n.s.4.5 ± 1.01.1
Fat body29 ± 7.38.140 ± 11120.72n.s.10 ± 1.22.7
Salivary gland8.1 ± 0.32.28.7 ± 1.92.60.93n.s.2.3 ± 0.30.6
Heart11 ± 4.53.112 ± 6.63.60.91n.s.  
Trachea      7.1 ± 1.71.8
Ovary  2.3 ± 0.40.7    
Virgin Spermatheca  20 ± 2.15.9    
Mated Spermatheca  27 ± 2.58.0    
Testis0.9 ± 0.30.2      
Accessory glands3.6 ± 0.61.0      
Carcass5.8 ± 1.01.68.7 ± 2.42.60.67n.s.4.1 ± 0.81.1
Rectal pad5.1 ± 1.41.46.0 ± 0.21.80.84n.s.  
Garland cells      13 ± 0.83.4
Whole body3.6 ± 0.33.4 ± 0.21.07n.s.3.9 ± 1.0
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0100004
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These data are for a ncRNA (non-coding RNA), i.e. an otherwise uncategorized RNA that does not encode a protein.
RNAs below a certain size are not detected by RNAseq and therefore zero values for them will be false. Some longer RNAs overlap highly-expressed protein genes. It is therefore advisable to check any positive sequence reads for ncRNAs in the UCSC Genome Browser (link above). (N.B. Data for Fat Body and Spermatheca may not be comparable with those from other tissues.)