FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
mir-1000
Name
mir-1000 stem loop
Annotation Symbol
CR43026
FlyBase ID
FBgn0262319
link out
SDs   Whole Body   Male v. Female
MicroRNA RPMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueRPMEnrichmentRPMEnrichmentM/Fp valueRPMEnrichment
Head3412 ± 2483.83433 ± 2475.80.99n.s.  
Eye3150 ± 7673.52410 ± 374.11.31n.s.  
Brain / CNS7080 ± 26067.97617 ± 1744130.93n.s.4035 ± 3743.7
Thoracicoabdominal ganglion2252 ± 142.52531 ± 944.30.89n.s.  
Crop22 ± 0.00.061 ± 1060.10.36n.s.  
Midgut1.0 ± 1.00.02.0 ± 2.00.01.00n.s.0.0 ± 0.00.0
Hindgut5.0 ± 3.00.04.0 ± 3.00.01.25n.s.6.0 ± 100.0
Malpighian Tubules1.0 ± 1.00.02.0 ± 1.00.01.00n.s.1.0 ± 1.00.0
Fat body73 ± 580.143 ± 190.11.70n.s.0.0 ± 0.00.0
Salivary gland57 ± 720.10.0 ± 0.00.028n.s.98 ± 1380.1
Trachea      11 ± 5.00.0
Ovary  13 ± 150.0    
Virgin Spermatheca  2.0 ± 4.00.0    
Mated Spermatheca  13 ± 110.0    
Testis25 ± 4.00.0      
Accessory glands34 ± 300.0      
Carcass441 ± 400.5370 ± 590.61.19n.s.161 ± 510.1
Rectal pad48 ± 5.00.1410 ± 5350.70.12n.s.  
Whole body897 ± 37588 ± 331.53p < 0.011078 ± 533
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0304486
RBFBtr0472816
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These data are for a microRNA.
The data were processed separately from those for other genes, and the units and heat-map ranges are different from them, as are the UCSC Genome Browser views (link above). Adult crop, salivary gland, fat body, spermatheca and heart were sequenced using a different chemistry from the other tissues. For certain microRNAs this results in a difference in which form (3′ or 5′ or both) is detected.