FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
mir-317
Name
mir-317 stem loop
Annotation Symbol
CR42900
FlyBase ID
FBgn0262378
Paralogues
No paralogues
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SDs   Whole Body   Male v. Female
MicroRNA TPMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueTPMEnrichmentTPMEnrichmentM/Fp valueTPMEnrichment
Head128680 ± 78892.3120008 ± 79063.41.07n.s.  
Eye117240 ± 686862.1109526 ± 610153.11.07n.s.  
Brain / CNS109050 ± 314422.0116734 ± 151043.30.93n.s.38200 ± 232002.5
Thoracicoabdominal ganglion139495 ± 107472.5115923 ± 93853.31.20n.s.  
Crop42877 ± 202520.829789 ± 55690.81.44n.s.  
Midgut4410 ± 19140.12409 ± 9090.11.83n.s.24118 ± 7471.6
Hindgut67353 ± 73821.273549 ± 99312.10.92n.s.50569 ± 124393.3
Malpighian Tubules17907 ± 100580.327154 ± 97400.80.66n.s.8913 ± 22970.6
Rectal pad39278 ± 44490.762118 ± 58931.80.63p < 0.01  
Salivary gland18348 ± 53740.354201 ± 488761.50.34n.s.7682 ± 43190.5
Fat body26826 ± 59380.525865 ± 21840.71.04n.s.1647 ± 110.1
Heart26893 ± 38480.517934 ± 11300.51.50p < 0.05  
Trachea      9110 ± 54330.6
Ovary  15370 ± 45370.4    
Virgin Spermatheca  21624 ± 33150.6    
Mated Spermatheca  21781 ± 36160.6    
Testis78450 ± 53601.4      
Accessory glands238272 ± 149854.3      
Carcass128965 ± 30262.3120122 ± 223423.41.07n.s.14631 ± 48931.0
Garland cells      6353 ± 16490.4
Whole body55405 ± 599635057 ± 49941.58p < 0.0515367 ± 640
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Rotate to see Transcript Table
FBgn0262378MaleFemaleLarvalHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGaRB: FBtr0472759RA: FBtr03042180%100%
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These data are for a microRNA.
The data were processed separately from those for other genes, and have different units and heat-map ranges.
There are only two possible transcripts for the microRNAs — the cleavage products RA and RB. The relative proportions of the two are represented by the area that they occupy in the transcript graphic, with an indication of the total abundance being provided by the colour intensity.
Adult crop, salivary gland, fat body, spermatheca and heart were sequenced using a different chemistry from the other tissues, as were larval Garland cells.