FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
lncRNA:CR43989
Name
long non-coding RNA:CR43989
Annotation Symbol
CR43989
FlyBase ID
FBgn0264721
Paralogues
No paralogues
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head2.8 ± 0.30.82.9 ± 1.41.50.95n.s.  
Eye3.0 ± 0.10.93.3 ± 0.91.60.93n.s.  
Brain / CNS0.9 ± 0.10.30.8 ± 0.1N.A.1.00n.s.1.1 ± 0.1N.A.
Thoracicoabdominal ganglion1.7 ± 0.00.51.5 ± 0.2N.A.1.00n.s.  
Crop5.9 ± 0.01.85.0 ± 0.62.51.18n.s.  
Midgut1.7 ± 0.40.52.0 ± 0.21.01.00n.s.0.6 ± 0.3N.A.
Hindgut3.9 ± 0.31.22.9 ± 0.41.41.36p < 0.051.7 ± 0.4N.A.
Malpighian Tubules1.7 ± 0.80.51.6 ± 0.4N.A.1.00n.s.0.8 ± 0.3N.A.
Rectal pad13 ± 1.23.94.7 ± 0.82.42.8p < 0.01  
Salivary gland7.2 ± 0.12.13.7 ± 2.11.81.94n.s.1.5 ± 0.3N.A.
Fat body2.9 ± 1.30.93.1 ± 4.01.60.92n.s.0.4 ± 0.5N.A.
Heart14 ± 3.04.24.2 ± 1.42.13.4p < 0.05  
Trachea      1.7 ± 0.3N.A.
Ovary  0.8 ± 0.3N.A.    
Virgin Spermatheca  2.1 ± 1.01.1    
Mated Spermatheca  1.1 ± 0.4N.A.    
Testis0.7 ± 0.30.2      
Accessory glands4.6 ± 1.51.4      
Carcass5.0 ± 1.01.53.1 ± 0.61.61.62n.s.0.9 ± 0.7N.A.
Garland cells      2.9 ± 3.11.5
Whole body3.4 ± 0.20.9 ± 0.21.68p < 0.010.9 ± 0.8
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0334097
download
These data are for a lncRNA (Long intervening non-coding RNA) that does not encode a protein.
It is advisable to check any positive sequence reads in the UCSC Genome Browser (link above). (N.B. Data for Fat Body and Spermatheca may not be comparable with those from other tissues.)