FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
lncRNA:CR44148
Name
long non-coding RNA:CR44148
Annotation Symbol
CR44148
FlyBase ID
FBgn0264997
Paralogues
No paralogues
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head0.1 ± 0.20.00.0 ± 0.0N.A.1.00n.s.  
Eye0.1 ± 0.10.00.2 ± 0.1N.A.1.00n.s.  
Brain / CNS0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.0.0 ± 0.00.0
Thoracicoabdominal ganglion0.0 ± 0.10.00.2 ± 0.3N.A.1.00n.s.  
Crop0.0 ± 0.00.00.1 ± 0.1N.A.1.00n.s.  
Midgut35 ± 8.17.514 ± 5.47.22.5p < 0.0527 ± 1.24.4
Hindgut1.2 ± 1.10.30.9 ± 0.6N.A.1.00n.s.0.8 ± 0.40.1
Malpighian Tubules0.7 ± 0.70.20.7 ± 1.0N.A.1.00n.s.0.0 ± 0.00.0
Rectal pad0.0 ± 0.00.00.4 ± 0.5N.A.1.00n.s.  
Salivary gland0.3 ± 0.00.10.0 ± 0.0N.A.1.00n.s.0.2 ± 0.20.0
Fat body0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.0.2 ± 0.30.0
Heart0.0 ± 0.00.00.1 ± 0.3N.A.1.00n.s.  
Trachea      0.0 ± 0.10.0
Ovary  0.0 ± 0.0N.A.    
Virgin Spermatheca  2.2 ± 2.11.1    
Mated Spermatheca  0.0 ± 0.0N.A.    
Testis0.0 ± 0.00.0      
Accessory glands0.1 ± 0.10.0      
Carcass0.4 ± 0.10.10.1 ± 0.1N.A.1.00p < 0.050.0 ± 0.00.0
Garland cells      0.5 ± 0.90.1
Whole body4.7 ± 2.01.6 ± 0.82.4n.s.6.3 ± 1.5
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0335490
download
These data are for a lncRNA (Long intervening non-coding RNA) that does not encode a protein.
It is advisable to check any positive sequence reads in the UCSC Genome Browser (link above). (N.B. Data for Fat Body and Spermatheca may not be comparable with those from other tissues.)